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ChIPseqR - Identifying Protein Binding Sites in High-Throughput Sequencing Data
ChIPseqR identifies protein binding sites from ChIP-seq and nucleosome positioning experiments. The model used to describe binding events was developed to locate nucleosomes but should flexible enough to handle other types of experiments as well.
Last updated
chipseqinfrastructure
4.70 score 694 downloadsChIPsim - Simulation of ChIP-seq experiments
A general framework for the simulation of ChIP-seq data. Although currently focused on nucleosome positioning the package is designed to support different types of experiments.
Last updated
infrastructurechipseq
4.00 score 7 scripts 597 downloads